Test includes: |
This test is performed by next-generation sequencing of targeted regions of the genes listed: ABL1, ANKRD26, ASXL1, ATRX, BCOR, BCORL1, BRAF, BRCC3, BTK, CALR, CBL, CBLB, CBLC, CCND2, CDC25C, CDKN2A, CEBPA, CREBBP, CSF1R, CSF3R, CTCF, CUX1, CXCR4, DCK, DDX41, DHX15, DNMT3A, ENTK1, ETV6, EZH2, FBXW7, FLT3, GATA1, GATA2, GNAS, GNB1, HRAS, IDH1, IDH2, IKZF1, JAK2, JAK3, KDM6A, KIT, KMT2A, KRAS, LUC7L2, MAP2K1, MPL, MYC, MYD88, NF1, NOTCH1, NPM1, NRAS, PDGFRA, PHF6, PIGA, PPM1D, PRPF40B, PTEN, PTPN11, RAD21, RBBP6, RHOA, RPS14, RUNX1, SAMD9, SAMD9L, SETBP1, SF1, SF3A1, SF3B1, SH2B3, SLC29A1, SMC1A, SMC3, SRSF2, STAG2, STAT3, STAT5B, TET2, TP53, U2AF1, U2AF2, UBA1, WT1, XPO1, and ZRSR2.
Gene |
Accession |
Target Exon |
ABL1 |
NM_005157 |
4, 5, 6, 7, 8, 9, 10 |
ANKRD26 |
NM_014915 |
1 (c.-113-c.-134) |
ASXL1 |
NM_015338 |
1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13 |
ASXL1 |
NM_001164603 |
5 |
ATRX |
NM_000489 |
8, 9, 10, 11, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32 |
BCOR |
NM_017745 |
2, 3, 4, 5, 6, 7, 9, 10, 11, 12, 13, 14, 15 |
BCOR |
NM_001123385 |
8 |
BCORL1 |
NM_021946 |
1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12 |
BRAF |
NM_004333 |
3, 10, 11, 12, 13, 15 |
BRCC3 |
NM_024332 |
1, 2, 3, 4, 5, 8, 9, 10, 11 |
BTK |
NM_000061 |
15 |
CALR |
NM_004343 |
8, 9 |
CBL |
NM_005188 |
2, 3, 4, 5, 7, 8, 9, 16 |
CBLB |
NM_170662 |
3, 9, 10 |
CBLC |
NM_012116 |
9, 10 |
CCND2 |
NM_001759 |
5 |
CDKN2A |
NM_058197 |
1 |
CDKN2A |
NM_058195 |
1 |
CDKN2A |
NM_000077 |
2, 3 |
CDKN2A |
NM_001195132 |
3 |
CEBPA |
NM_004364 |
1 |
CREBBP |
NM_004380 |
1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22 ,23, 24, 25, 26, 27, 28, 29, 30, 31 |
CSF1R |
NM_005211 |
7, 12, 15, 22 |
CSF3R |
NM_156039 |
17 |
CSF3R |
NM_172313 |
10, 18 |
CSF3R |
NM_000760 |
14, 15, 16 |
CTCF |
NM_006565 |
3, 4, 5, 6, 7, 8, 9, 11, 12 |
CUX1 |
NM_001202543 |
15, 16, 17, 18, 19, 20, 21, 22, 23, 24 |
CUX1 |
NM_001913 |
1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22 ,23 |
CUX1 |
NM_181552 |
1 |
CXCR4 |
NM_003467 |
1, 2 |
DCK |
NM_000788 |
2, 3 |
DDX41 |
NM_016222 |
1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17 |
DHX15 |
NM_001358 |
3 |
DNMT3A |
NM_022552 |
2, 3, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23 |
DNMT3A |
NM_153759 |
1,2 |
DNMT3A |
NM_175630 |
4 |
ETNK1 |
NM_018638 |
3 |
ETV6 |
NM_001987 |
1, 2, 3, 4, 5, 6, 7, 8 |
EZH2 |
NM_004456 |
2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20 |
FBXW7 |
NM_018315 |
1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11 |
FLT3 |
NM_004119 |
8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 19, 20, 21 |
GATA1 |
NM_002049 |
2 |
GATA2 |
NM_032638 |
2, 3, 4, 5, 6 |
GNAS |
NM_000516 |
8, 9, 10, 11 |
GNB1 |
NM_002074 |
3, 4, 5, 6, 7, 8, 9, 10, 11 |
HRAS |
NM_005343 |
2, 3, 4 |
IDH1 |
NM_005896 |
3, 4 |
IDH2 |
NM_002168 |
4, 6 |
IKZF1 |
NM_001220769 |
5 |
IKZF1 |
NM_001220767 |
2, 3, 4, 5, 7 |
IKZF1 |
NM_001220771 |
4 |
IKZF1 |
NM_001291845 |
4 |
IKZF1 |
NM_001291847 |
5 |
JAK2 |
NM_004972 |
12, 13, 14, 15, 16, 19, 20, 21, 22, 23, 24, 25 |
JAK3 |
NM_000215 |
3, 11, 13, 15, 16, 18, 19 |
KDM6A |
NM_021140 |
1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29 |
KDM6A |
NM_001291415 |
14 |
KIT |
NM_000222 |
1, 2, 5, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18 |
KMT2A |
NM_005933 |
1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36 |
KMT2A |
NM_001197104 |
14 |
KRAS |
NM_004985 |
2, 3, 4 |
LUC7L2 |
NM_016019 |
1, 2, 3, 4, 5, 6, 7, 8, 9, 10 |
LUC7L2 |
NM_001244585 |
2 |
MAP2K1 |
NM_002755 |
2, 3 |
MPL |
NM_005373 |
10, 12 |
MYC |
NM_002467 |
1, 2, 3 |
MYD88 |
NM_002468 |
4, 5 |
MYD88 |
NM_001172567 |
3 |
NF1 |
NM_000267 |
1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51, 52, 53, 54, 55, 56, 57 |
NF1 |
NM_001128147 |
15 |
NF1 |
NM_001042492 |
31 |
NOTCH1 |
NM_017617 |
26, 27, 28, 31, 32, 33, 34,c.*370 to c.*380 |
NPM1 |
NM_002520 |
12 |
NRAS |
NM_002524 |
2, 3, 4, 5 |
PDGFRA |
NM_006206 |
12, 14, 15, 18 |
PHF6 |
NM_032335 |
2, 3, 4, 5 ,6, 7, 8 |
PHF6 |
NM_001015877 |
10 |
PHF6 |
NM_032458 |
9 |
PIGA |
NM_002641 |
2, 3, 4, 5 ,6 |
PIGA |
NM_020473 |
1 |
PPM1D |
NM_003620 |
6 |
PRPF40B |
NM_001031698 |
1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26 |
PTEN |
NM_000314 |
1, 2, 3, 4, 5, 6, 7, 8, 9 |
PTPN11 |
NM_002834 |
3, 4, 7, 8, 12, 13 |
PTPN11 |
NM_080601 |
11 |
RAD21 |
NM_006265 |
2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14 |
RBBP6 |
NM_006910 |
p.1444, p.1451, p.1569, p.1654, p.1673 |
RHOA |
NM_001664 |
2, 3, 4, 5 |
RUNX1 |
NM_001754 |
2, 3, 5, 6, 7, 8, 9 |
RUNX1 |
NM_001122607 |
1, 5 |
SAMD9 |
NM_017654 |
3 |
SAMD9L |
NM_152703 |
5 |
SETBP1 |
NM_015559 |
4 (p.799-p.950) |
SF1 |
NM_004630 |
2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13 |
SF1 |
NM_201995 |
14 |
SF1 |
NM_001178030 |
1 |
SF3A1 |
NM_005877 |
1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12 (partial), 13, 14, 15, 16 (partial) |
SF3B1 |
NM_012433 |
12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24 |
SH2B3 |
NM_005475 |
2, 3, 4, 5, 6, 7, 8 |
SLC29A1 |
NM_001078175 |
4, 13 |
SMC1A |
NM_006306 |
1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25 |
SMC1A |
NM_001281463 |
2 |
SMC3 |
NM_005445 |
1, 2, 3, 4, 5 (partial), 6, 7, 8, 9, 10,11, 12 (partial), 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29 |
SRSF2 |
NM_003016 |
1, 2 |
STAG2 |
NM_006603 |
2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33 |
STAG2 |
NM_001042749 |
32 |
STAT3 |
NM_003150 |
20 |
STAT3 |
NM_139276 |
21 |
STAT5B |
NM_012448 |
15, 16, 17, 18 |
TET2 |
NM_001127208 |
4, 5, 6, 7, 8, 9, 10, 11 |
TET2 |
NM_017628 |
3 |
TP53 |
NM_000546 |
1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11 |
TP53 |
NM_001276696 |
10 |
TP53 |
NM_001276695 |
10 |
U2AF1 |
NM_006758 |
2, 6, 7 |
U2AF1 |
NM_001025204 |
6 |
U2AF2 |
NM_007279 |
1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12 |
UBA1 |
NM_003334 |
3 |
WT1 |
NM_000378 |
1, 2, 3, 4, 5, 6, 7, 9 |
WT1 |
NM_001198552 |
8 |
XPO1 |
NM_003400 |
15, 16, 18 |
ZRSR2 |
NM_005089 |
1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11 |
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